Workshop: Workshop on Quantitative and Functional Proteomics        

Date: April 23-26, 2018

Timings: 9:00 AM-5:30 PM

Venue: Center for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to be University)


Schedule


Workshop Program

Day 1:

Tutorial Lectures

  • Introduction to proteomics
  • Basics of LC-MS/MS analysis
  • Guest talk by Dr. Niranjan Chakraborty
  • Key concepts of mass spectrometry data analysis
  • Sample preparation strategies
  • Day 2:

    Tutorial Lectures

  • Introduction to Quantitative proteomics
  • LC-MS/MS operation
  • Talk on data analysis for Quantitative proteomics
  • Day 3:

    Tutorial Lectures

  • Talk on sample preparation strategies for multi-PTM analysis
  • Day 4:

    Tutorial Lectures

  • Talk on data analysis for multi-PTM data sets
  • Validation of proteomic data
  • Hands on training

  • Sample preparation I (In-solution digestion)
  • Hands on training

  • TMT labeling
  • Data analysis for qualitative proteomics
  • Hands on training

  • Phospho-proteomics enrichment
  • Hands on training

  • Data analysis for phospho-proteomics data